# importing modules import sys as sys import os import numpy # Getting the name of the directory where this file is present. current = os.path.dirname(os.path.realpath(__file__)) # src # Getting the parent directory name where the current directory is present. parent = os.path.dirname(current) # Simulation # Getting the grandparent directory name gparent = os.path.dirname(parent) # RecruitmentSynchronization_SMCs # The path where the simExp.py is saved mpath = gparent + '\\cellLib\\Scripts' # appending a path sys.path.append(mpath) import simExp # The simulation .sedml file simfile = gparent+'\\Experiments\\MWC_10_test.sedml' # Set the parameters for simulation start, ending, pointInterval = 0, 420, 0.01 savefiles=[parent+'\\simulatedData\\simFig4'] indexStart = int(200/pointInterval) indexEnd = int(ending/pointInterval) + 1 varSet = {'clamp_para/t_act':{'constants':200},'free_para_10/K':{'constants':4.5},'free_para_10/V0':{'constants':-20}} varLoop = {'clamp_para/V_actTest':{'constants':numpy.array(range(-100, 52, 2))}} varSave = {'clamp_para/V_actTest':{'constants':True},'output_10/P_o':{'algebraic':True},'output_10/Q':{'algebraic':True},'output_10/P_ss':{'algebraic':True},'output_10/Q_ss':{'algebraic':True}} simExp.simExp(simfile, savefiles,start, ending, pointInterval,indexStart,indexEnd,varSet,varLoop,varSave)