<?xml version="1.0" encoding="UTF-8"?>
<model xmlns="http://www.cellml.org/cellml/2.0#" name="Boron_CO2">
  <units name="per_s">
    <unit exponent="-1" units="second"/>
  </units>
  <units name="per_m">
    <unit exponent="-1" units="metre"/>
  </units>
  <units name="m_per_s">
    <unit units="metre"/>
    <unit exponent="-1" units="second"/>
  </units>
  <units name="mol_per_m3">
    <unit units="mole"/>
    <unit exponent="-3" units="metre"/>
  </units>
  <units name="mol_per_m2_s">
    <unit units="mole"/>
    <unit exponent="-2" units="metre"/>
    <unit exponent="-1" units="second"/>
  </units>
  <units name="mol_per_m3_s">
    <unit units="mole"/>
    <unit exponent="-3" units="metre"/>
    <unit exponent="-1" units="second"/>
  </units>
  <units name="J_per_C">
    <unit units="joule"/>
    <unit exponent="-1" units="coulomb"/>
  </units>
  <units name="C_per_mol">
    <unit units="coulomb"/>
    <unit exponent="-1" units="mole"/>
  </units>
  <units name="J_per_mol_K">
    <unit units="joule"/>
    <unit exponent="-1" units="mole"/>
    <unit exponent="-1" units="kelvin"/>
  </units>
  <units name="m3_per_mol">
    <unit exponent="3" units="metre"/>
    <unit exponent="-1" units="mole"/>
  </units>
  <component name="main">
    <variable name="t" units="second"/>
    <variable name="CO2_o" units="mol_per_m3"/>
    <variable name="CO2_i" units="mol_per_m3"/>
    <variable name="HCO3_i" units="mol_per_m3"/>
    <variable name="HCO3_o" units="mol_per_m3"/>
    <variable name="TA_i" units="mol_per_m3" initial_value="0.0"/>
    <variable name="H_i" units="mol_per_m3" initial_value="3.981071705534970e-05"/>
    <variable name="H_o" units="mol_per_m3" initial_value="1.995262314968879e-05"/>
    <variable name="H_Lim" units="mol_per_m3" initial_value="5.011872336272725e-05"/>
    <variable name="J_CO2" units="mol_per_m2_s"/>
    <variable name="J_HCO3" units="mol_per_m2_s"/>
    <variable name="J_H" units="mol_per_m2_s"/>
    <variable name="pH_i" units="dimensionless"/>
    <variable name="pH_o" units="dimensionless"/>
    <variable name="pH_Lim" units="dimensionless"/>
    <variable name="alpha" units="dimensionless"/>
    <variable name="epsilon" units="dimensionless"/>
    <variable name="T" units="kelvin" initial_value="296.15"/>
    <variable name="R" units="J_per_mol_K" initial_value="8.314"/>
    <variable name="F" units="C_per_mol" initial_value="96485"/>
    <variable name="r" units="metre" initial_value="0.00025"/>
    <variable name="rho" units="per_m"/>
    <variable name="beta" units="mol_per_m3" initial_value="26"/>
    <variable name="P_CO2" units="m_per_s" initial_value="6e-5"/>
    <variable name="P_HCO3" units="m_per_s" initial_value="5e-9"/>
    <variable name="K_HA" units="mol_per_m3" initial_value="1e-3"/>
    <variable name="V_m" units="J_per_C" initial_value="-0.057" interface="public"/>
    <variable name="k" units="per_s" initial_value="300"/>
    <math xmlns="http://www.w3.org/1998/Math/MathML" xmlns:cellml="http://www.cellml.org/cellml/2.0#">
      <apply>
        <eq/>
        <ci>CO2_o</ci>
        <piecewise>
          <piece>
            <cn cellml:units="mol_per_m3">0.0</cn>
            <apply>
              <lt/>
              <ci>t</ci>
              <cn cellml:units="second">100</cn>
            </apply>
          </piece>
          <piece>
            <cn cellml:units="mol_per_m3">1.1877</cn>
            <apply>
              <lt/>
              <ci>t</ci>
              <cn cellml:units="second">2800</cn>
            </apply>
          </piece>
          <otherwise>
            <cn cellml:units="mol_per_m3">0.0</cn>
          </otherwise>
        </piecewise>
      </apply>
      <apply>
        <eq/>
        <ci>rho</ci>
        <apply>
          <divide/>
          <cn cellml:units="dimensionless">2</cn>
          <ci>r</ci>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>HCO3_o</ci>
        <apply>
          <divide/>
          <apply>
            <times/>
            <ci>K_HA</ci>
            <ci>CO2_o</ci>
          </apply>
          <ci>H_o</ci>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>epsilon</ci>
        <apply>
          <exp/>
          <apply>
            <divide/>
            <apply>
              <times/>
              <apply>
                <minus/>
                <ci>V_m</ci>
              </apply>
              <ci>F</ci>
            </apply>
            <apply>
              <times/>
              <ci>R</ci>
              <ci>T</ci>
            </apply>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>pH_Lim</ci>
        <apply>
          <minus/>
          <apply>
            <log/>
            <apply>
              <times/>
              <cn type="e-notation" cellml:units="m3_per_mol">1<sep/>-3</cn>
              <ci>H_Lim</ci>
            </apply>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>pH_i</ci>
        <apply>
          <minus/>
          <apply>
            <log/>
            <apply>
              <times/>
              <cn type="e-notation" cellml:units="m3_per_mol">1<sep/>-3</cn>
              <ci>H_i</ci>
            </apply>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>pH_o</ci>
        <apply>
          <minus/>
          <apply>
            <log/>
            <apply>
              <times/>
              <cn type="e-notation" cellml:units="m3_per_mol">1<sep/>-3</cn>
              <ci>H_o</ci>
            </apply>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>J_CO2</ci>
        <apply>
          <times/>
          <ci>P_CO2</ci>
          <apply>
            <minus/>
            <ci>CO2_o</ci>
            <ci>CO2_i</ci>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>J_HCO3</ci>
        <apply>
          <divide/>
          <apply>
            <times/>
            <apply>
              <divide/>
              <apply>
                <times/>
                <ci>P_HCO3</ci>
                <ci>V_m</ci>
                <ci>F</ci>
              </apply>
              <apply>
                <times/>
                <ci>R</ci>
                <ci>T</ci>
              </apply>
            </apply>
            <apply>
              <minus/>
              <ci>HCO3_o</ci>
              <apply>
                <times/>
                <ci>HCO3_i</ci>
                <ci>epsilon</ci>
              </apply>
            </apply>
          </apply>
          <apply>
            <minus/>
            <cn cellml:units="dimensionless">1</cn>
            <ci>epsilon</ci>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>J_H</ci>
        <piecewise>
          <piece>
            <apply>
              <times/>
              <apply>
                <divide/>
                <ci>k</ci>
                <ci>rho</ci>
              </apply>
              <apply>
                <minus/>
                <ci>H_i</ci>
                <ci>H_Lim</ci>
              </apply>
            </apply>
            <apply>
              <lt/>
              <ci>pH_i</ci>
              <ci>pH_Lim</ci>
            </apply>
          </piece>
          <otherwise>
            <cn cellml:units="mol_per_m2_s">0.0</cn>
          </otherwise>
        </piecewise>
      </apply>
      <apply>
        <eq/>
        <ci>alpha</ci>
        <apply>
          <divide/>
          <ci>H_i</ci>
          <apply>
            <plus/>
            <ci>H_i</ci>
            <ci>K_HA</ci>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>CO2_i</ci>
        <apply>
          <times/>
          <ci>alpha</ci>
          <ci>TA_i</ci>
        </apply>
      </apply>
      <apply>
        <eq/>
        <ci>HCO3_i</ci>
        <apply>
          <times/>
          <apply>
            <minus/>
            <cn cellml:units="dimensionless">1</cn>
            <ci>alpha</ci>
          </apply>
          <ci>TA_i</ci>
        </apply>
      </apply>
      <apply>
        <eq/>
        <apply>
          <diff/>
          <bvar>
            <ci>t</ci>
          </bvar>
          <ci>TA_i</ci>
        </apply>
        <apply>
          <times/>
          <ci>rho</ci>
          <apply>
            <plus/>
            <ci>J_CO2</ci>
            <ci>J_HCO3</ci>
          </apply>
        </apply>
      </apply>
      <apply>
        <eq/>
        <apply>
          <diff/>
          <bvar>
            <ci>t</ci>
          </bvar>
          <ci>H_i</ci>
        </apply>
        <apply>
          <times/>
          <apply>
            <divide/>
            <apply>
              <times/>
              <cn cellml:units="dimensionless">2.303</cn>
              <ci>H_i</ci>
            </apply>
            <ci>beta</ci>
          </apply>
          <ci>rho</ci>
          <apply>
            <minus/>
            <apply>
              <minus/>
              <apply>
                <times/>
                <apply>
                  <minus/>
                  <cn cellml:units="dimensionless">1</cn>
                  <ci>alpha</ci>
                </apply>
                <ci>J_CO2</ci>
              </apply>
              <apply>
                <times/>
                <ci>alpha</ci>
                <ci>J_HCO3</ci>
              </apply>
            </apply>
            <ci>J_H</ci>
          </apply>
        </apply>
      </apply>
    </math>
  </component>
</model>
