DateAuthorLogOptionsExposure
2021-11-26Shelley FongUpdating Knames [files][create_exposure]
2021-11-16Shelley FongUsing sympy for rational nullspace [files][create_exposure]
2021-11-16Shelley FongFinding rational nullspace [files][create_exposure]
2021-11-11Shelley FongAdding GDP phosphorylation rxn [files][create_exposure]
2021-11-02Shelley FongAutomating more [files][create_exposure]
2021-10-28Shelley FongRenaming kinetic_parameters.py [files][create_exposure]
2021-10-26Shelley FongRenaming rxnID [files][create_exposure]
2021-10-26Shelley FongRemoving legacy excel file [files][create_exposure]
2021-10-26Shelley FongAdding intermediate compound in GEF reaction scheme [files][create_exposure]
2021-10-21Shelley FongUpdating equations to reflect GEF action and remove wrong phosphate bindings [files][create_exposure]
2021-10-20Shelley FongRemoving MATLAB files [files][create_exposure]
2021-10-20Shelley FongAdding remaining python files or modifications [files][create_exposure]
2021-10-20Shelley FongRename folder and add new py solver file [files][create_exposure]
2021-10-15Shelley FongAdding ODEs for RGP and LRGP [files][create_exposure]
2021-10-14Shelley FongUpdating contraints [files][create_exposure]
2021-10-14Shelley FongIncluding phosphate binding RG and LRG as a separate reaction. Updating stoichiometry and including 2 new reactions and 2 new chemical species as a result [files][create_exposure]
2021-10-13Shelley Fongwapping G for RG and LRG as substrates for act1 and act2 reactions [files][create_exposure]
2021-10-12Shelley FongAdding ODE for Pi [files][create_exposure]
2021-10-12Shelley FongUndoing previous change [files][create_exposure]
2021-10-12Shelley FongRemove R and LR terms from mu affinities for v_act1/2 [files][create_exposure]
2021-10-11Shelley FongAdding conservation of chemostat mass check in environment. Fixing ICs to have negligible enzyme complexes [files][create_exposure]
2021-10-04Shelley Fongadding mu_Pi to reaction velocities [files][create_exposure]
2021-10-04Shelley FongAdding phosphate group [files][create_exposure]
2021-10-01Shelley FongUpdating reaction equations with new stoichiometry for Act reaction [files][create_exposure]
2021-10-01Shelley FongSeparate G from R in stoichiometry [files][create_exposure]
2021-09-28Shelley FongUpdating closed loops in G protein metabolism [files][create_exposure]
2021-09-17Shelley FongUsing common PMR repo for units_and_constants [files][create_exposure]
2021-09-16Shelley Fongrenaming parameters and updating matlab file [files][create_exposure]
2021-09-16Shelley FongChanging names of parameters [files][create_exposure]
2021-09-07Shelley Fongadding Pub: out [files][create_exposure]